FTO参与的m6A 修饰对肺成纤维细胞辐射损伤的影响及作用机制

Effect and mechanism of FTO-mediated m6A modification in radiation-induced injury in lung fibroblasts

  • 摘要:
    目的 探讨肺成纤维细胞辐射损伤过程中N6-甲基腺嘌呤(m6A)去甲基化酶脂肪量与肥胖相关蛋白(FTO)和其下游靶基因转化生长因子β受体1(TGFBR1)表达的变化及其调控机制,为研发放射性肺纤维化(RIPF)的靶向药物提供理论依据。
    方法 将人肺成纤维细胞HFL-1按照射剂量分为4组,分别为对照组(0 Gy)和2、4、6 Gy照射组,选定照射剂量;将人肺成纤维细胞HFL-1按照射后时间分为对照组(0 Gy)和照射后24、48、72 h组,选定照射后时间。按选定的照射剂量和照射后时间,后续实验分组为对照组和照射组,定量检测总RNA中m6A甲基化含量。采用简单随机抽样法将小鼠随机分为6组,分别为照射后4周、8周和16周组及对应的对照组,每组5只,给予小鼠20 Gy(剂量率为2.0 Gy/min)全胸照射,建立RIPF小鼠模型,提取小鼠原代肺成纤维细胞。采用慢病毒感染法建立稳定低表达FTO的HFL-1细胞;通过m6A2 Target网站预测FTO的下游靶基因;采用实时荧光定量聚合酶链反应(qRT-PCR)法检测HFL-1细胞照射后和RIPF小鼠原代肺成纤维细胞中FTO、TGFBR1以及纤维化相关分子Ⅰ型胶原蛋白α1链(COL1A1)和纤连蛋白1(FN1) 信使RNA(mRNA)的表达变化,利用Western blots法检测照射后HFL-1细胞中FTO、TGFBR1以及纤维化相关分子蛋白Fibronectin和Collagen1的表达变化,采用甲基化RNA免疫共沉淀(MeRIP)-qRT-PCR检测照射后HFL-1细胞中TGFBR1 mRNA的m6A富集情况。符合正态分布的计量资料的组间比较采用独立样本t检验(方差齐)。
    结果 与对照组相比,照射组HFL-1细胞总RNA中的m6A含量降低(t=20.970,P<0.01)。与对照组相比,2、4、6 Gy照射组和照射后24、48、72 h组HFL-1细胞的FTO mRNA和蛋白表达升高(t=14.370、9.247、8.744、18.840、12.640、10.010、7.510、10.010、4.508、25.080、11.400,均P<0.05)。与对照组比较,照射组HFL-1细胞TGFBR1 mRNA、纤维化相关分子(COL1A1、FN1)mRNA和蛋白表达升高(t=2.995、3.370、3.075、20.560、9.339、9.478,均P<0.05)。与对照组相比,照射后8周和16周RIPF小鼠原代肺成纤维细胞中FTO mRNA、COL1A1 mRNA和FN1 mRNA表达升高(t=13.310、4.095、4.188、5.951、3.335、8.694,均P<0.05)。与对照组相比,照射组HFL-1细胞TGFBR1 mRNA的m6A富集明显降低(t=3.536,P<0.05)。敲低FTO可以抑制照射引起的TGFBR1和纤维化相关分子mRNA和蛋白的表达升高(t=8.424、10.990、9.663、5.580,均P<0.05)。
    结论 辐射可以诱导肺成纤维细胞中去甲基化酶FTO的表达上调,通过抑制m6A修饰的方式增强TGFBR1的表达,进而促进RIPF的进展。

     

    Abstract:
    Objective To investigate the changes in the expression levels of N6-methyladenosine (m6A) demethylase fat mass and obesity-associated protein (FTO) and its downstream target gene, transforming growth factor beta receptor 1 (TGFBR1), during the process of radiation-induced injury in lung fibroblasts, as well as their regulatory mechanisms, in order to provide a theoretical basis for the development of targeted drugs for radiation-induced pulmonary fibrosis (RIPF).
    Methods Human lung fibroblasts-1 (HFL-1) were divided into 4 groups according to the irradiation dose, namely the control group (0 Gy) and the irradiation groups with 2 Gy, 4 Gy, and 6 Gy respectively, and the irradiation doses were selected. HFL-1 cells were divided into the control group (0 Gy) and the groups at 24 h, 48 h, and 72 h after irradiation according to the time after irradiation, and the time points after irradiation were selected. The subsequent experiments groups were divided into control group and irradiation group. The subsequent experiments were grouped into control and irradiated groups based on the selected radiation dose and post-irradiation time. The m6A methylation content in total RNA was quantitatively detected. Mice were randomly divided into six groups using simple random sampling: 4-week, 8-week, and 16-week post-irradiation groups and their corresponding control groups (5 mice per group). The irradiation groups received 20 Gy whole-thorax irradiation at a dose rate of 2.0 Gy/min to establish the RIPF mouse model. Primary lung fibroblasts were then extracted from the mice. HFL-1 cells with stable FTO knockdown were established through lentiviral infection. The downstream target genes of FTO were predicted through the m6A2 Target website. The changes in the expression levels of the messenger RNA (mRNA) of FTO, TGFBR1, and the fibrosis-related molecules collagen type Ⅰ alpha 1 chain (COL1A1) and fibronectin 1 (FN1) in irradiated HFL-1 cells and primary lung fibroblasts were detected by using real-time quantitative polymerase chain reaction (qRT-PCR). The changes in the protein expression levels of FTO, TGFBR1, and the fibrosis-related molecules proteins Fibronectin and Collagen1 in irradiated HFL-1 cells were detected by using Western blot analysis. The m6A enrichment of TGFBR1 mRNA in irradiated HFL-1 cells was detected through methylated RNA immunoprecipitation-qRT-PCR (MeRIP-qRT-PCR). The independent samples t-test (with equal variances) was used to compared the measurement data that conform to the normal distribution between groups.
    Results Compared with the control group, the m6A content in the total RNA of HFL-1 cells in the irradiation group decreased (t=20.970, P<0.01). Compared with the control group, the FTO mRNA and protein expression in HFL-1 cells of the 2, 4, and 6 Gy irradiation groups and the groups at 24, 48, and 72 h after irradiation increased (t=14.370, 9.247, 8.744, 18.840, 12.640, 10.010, 7.510, 10.010, 4.508, 25.080, 11.400; all P<0.05). Compared with the control group, the mRNA and protein expression of TGFBR1, fibrosis-related molecules (COL1A1, FN1) in the irradiation group increased (t=2.995, 3.370, 3.075, 20.560, 9.339, 9.478; all P<0.05). At 8 and 16 weeks post-irradiation, the mRNA expression levels of FTO, COL1A1, and FN1 in the primary lung fibroblasts of RIPF mice in the irradiation group were elevated compared with those in the control group (t=13.310, 4.095, 4.188, 5.951, 3.335, 8.694; all P<0.05). Compared with the control group, the m6A enrichment of TGFBR1 mRNA in HFL-1 cells of the irradiation group was significantly decreased (t=3.536, P<0.05). Compared with the irradiated group, knockdown of FTO suppressed the mRNA and protein expression of TGFBR1 and fibrosis-related molecules (COL1A1, FN1) induced by irradiation to be elevated (t=8.424, 10.990, 9.663, 5.580; all P<0.05).
    Conclusions Radiation can induce the upregulation of demethylase FTO expression in lung fibroblasts, enhancing TGFBR1 expression by inhibiting m6A modification. This inhibition, in turn, promotes RIPF progression.

     

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